NextGENe

Description:
NextGENe® is next generation sequencing (NGS) analysis software designed for fast, accurate and user-friendly processing of sequencing data. It provides an intuitive point-and-click interface that eliminates the need for scripting or advanced bioinformatics expertise, making NGS data analysis accessible to a broad range of laboratories.

The software supports sequencing data generated by major NGS platforms, including Illumina® iSeq, MiniSeq, MiSeq, NextSeq, HiSeq and NovaSeq, as well as Ion Torrent™ Ion GeneStudio S5, PGM and Proton systems and other sequencing platforms. Running on Microsoft Windows, NextGENe® is an effective alternative to CLC Genomics Workbench, Lasergene SeqMan Pro and other bioinformatics software.

NextGENe® combines multiple analysis modules within a single software package, supporting SNP and indel detection, structural variant analysis, sample comparison, CNV analysis, de novo assembly, RNA-Seq, gene expression analysis, ChIP-Seq, miRNA and metagenomic analysis, together with automated workflows, customizable reports and variant annotation.

Features:

• intuitive point-and-click interface
• supports major NGS sequencing platforms
• SNP and indel detection
• structural variant and gene fusion analysis
• copy number variation (CNV) analysis
• whole genome sequencing (WGS)
• whole exome sequencing (WES)
• targeted resequencing
• de novo assembly
• RNA-Seq analysis
• gene expression analysis
• ChIP-Seq, DGE, miRNA and metagenomics
• Family/Trio comparison
• Tumor-Normal comparison
• UMI analysis support
• NextGENe AutoRun automation pipeline
• customizable reports and quality metrics
• annotated reference genomes and variant annotation

Applications:

• SNP and indel analysis
• Whole Genome Sequencing (WGS)
• Whole Exome Sequencing (WES)
• targeted sequencing
• structural variant analysis
• gene fusion detection
• CNV analysis
• aneuploidy detection
• RNA-Seq
• gene expression analysis
• ChIP-Seq
• Digital Gene Expression (DGE)
• miRNA analysis
• metagenomics
• rare disease research
• family and trio analysis
• somatic mutation analysis
• cancer research